Detailed information of Aala_g2056.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_005090378.1, synembryn-A [Aplysia californica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6P4W7Chaperone Ric-8A OS=Xenopus tropicalis OX=8364 GN=ric8a PE=2 SV=1
Q45TX8Chaperone Ric-8A OS=Xenopus laevis OX=8355 GN=ric8a PE=2 SV=2
Q642H7Chaperone Ric-8A OS=Danio rerio OX=7955 GN=ric8a PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10165Ric8Guanine nucleotide exchange factor synembrynFamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13894zf-C2H2_4C2H2-type zinc fingerDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF18658zf-C2H2_12Spin-doc zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR019318FamilyGuanine nucleotide exchange factor, Ric8Interproscan
IPR008376DomainSynembrynInterproscan
IPR017946Homologous_superfamilyPLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyInterproscan
IPR051057FamilyPhosphoinositide phospholipase C domain-containing proteinInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR040647DomainSPIN-DOC-like, zinc-fingerInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12425SYNEMBRYNInterproscan
PTHR13593UNCHARACTERIZEDInterproscan
PTHR22954RETROVIRAL PROTEASE-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24409ZINC FINGER PROTEIN 142Interproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR31511PROTEIN CBG23764Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001965Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0006629Biological Processlipid metabolic processInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24642ZBED5_7_8_9, BUSTER; zinc finger BED domain-containing protein 5/7/8/9-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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