Genomic Location: :...
NR annotation: CAF2142905.1, unnamed protein product, partial [Rotaria magnacalcarata]
| CDS | ||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| O00370 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 |
| P08548 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 |
| P11369 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF19270 | FBO_C | F-box only protein C-terminal region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR053134 | Family | RNA-directed DNA polymerase homolog | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR045118 | Family | F-box only protein FBXO9/FBXO48 | Interproscan |
| IPR045464 | Domain | F-box protein Hrt3/FBXO9, C-terminal | Interproscan |
| IPR052343 | Family | Diverse Retrotransposon and Effector-Associated Protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21301 | REVERSE TRANSCRIPTASE | Interproscan |
| PTHR24559 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN | Interproscan |
| PTHR45134 | - | Interproscan |
| PTHR19446 | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR46114 | APPLE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR12874 | F-BOX ONLY PROTEIN 48-RELATED | Interproscan |
| PTHR46890 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0019005 | Cellular Component | SCF ubiquitin ligase complex | Interproscan |
| GO:0031146 | Biological Process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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