Detailed information of Aala_g2062.t1 in Alatina alata

Genomic Location: :...
NR annotation: EDO39582.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PC19RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Danio rerio OX=7955 GN=ssu72 PE=2 SV=1
Q17QI2RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Bos taurus OX=9913 GN=SSU72 PE=2 SV=1
Q5ZJQ7RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Gallus gallus OX=9031 GN=SSU72 PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF04722Ssu72Ssu72-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR050331FamilyZinc fingerInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR050733FamilyVitellogenin/ApolipophorinInterproscan
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR015816Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR000366FamilyGPCR fungal pheromone mating factor, STE2Interproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR006811FamilyRNA polymerase II subunit AInterproscan
IPR001463FamilySodium:alanine symporterInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16515PR DOMAIN ZINC FINGER PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR23345VITELLOGENIN-RELATEDInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR20383RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0004932Molecular Functionmating-type factor pheromone receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0004721Molecular Functionphosphoprotein phosphatase activityInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0008420Molecular FunctionRNA polymerase II CTD heptapeptide repeat phosphatase activityInterproscan
GO:0070940Biological Processobsolete dephosphorylation of RNA polymerase II C-terminal domainInterproscan
GO:0005283Molecular Functionamino acid:sodium symporter activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0006865Biological Processamino acid transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05637LAMA1_2; laminin, alpha 1/2-Viral myocarditisko05416deepkoala

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