Detailed information of Aala_g2063.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028401203.1, uncharacterized protein LOC114524257 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9SCN0Probable glycosyltransferase STELLO2 OS=Arabidopsis thaliana OX=3702 GN=STL2 PE=1 SV=1
P54275DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1
Q5XXB5DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00488MutS_VMutS domain VDomainInterproscan
PF00428Ribosomal_60s60s Acidic ribosomal proteinFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033467DomainTesmin/TSO1-like CXC domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR044076FamilyLarge ribosomal subunit protein P2, eukaryotesInterproscan
IPR005049FamilySTELLO-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052479FamilyGPI-anchored Adhesion RegulatorInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan
PTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERInterproscan
PTHR31362GLYCOSYLTRANSFERASE STELLO1-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR35185SERINE/THREONINE-RICH PROTEIN ADG2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0032301Cellular ComponentMutSalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0002182Biological Processcytoplasmic translational elongationInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26232DDIT4L, CHRB; DNA damage-inducible transcript 4-like protein-Membrane traffickingko04131deepkoala

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