Detailed information of Aala_g2066.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH1263135.1, CBSL [Branchiostoma lanceolatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7RYW6Cysteine synthase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cys-17 PE=3 SV=1
P50867Cysteine synthase 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cysB PE=3 SV=2
O59701Cysteine synthase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cys11 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|PB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00564PB1PB1 domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001216Binding_siteCysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment siteInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR050214FamilyCysteine Synthase/Cystathionine Beta-SynthaseInterproscan
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000270DomainPB1 domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051741FamilyPartitioning defective 6 homolog proteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR053118FamilyHost-Pathogen Interaction Adhesin/Serine-richInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10314CYSTATHIONINE BETA-SYNTHASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR14102PAR-6-RELATEDInterproscan
PTHR36144S-ANTIGEN PROTEINInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006535Biological Processcysteine biosynthetic process from serineInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019344Biological Processcysteine biosynthetic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007098Biological Processcentrosome cycleInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15725czcC, cusC, cnrC; outer membrane protein, heavy metal efflux system-Cysteine and methionine metabolismko00270deepkoala
Signaling pathways regulating pluripotency of stem cellsko04550deepkoala
Chromosome and associated proteinsko03036deepkoala
Transportersko02000deepkoala

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