Detailed information of Aala_g2079.t1 in Alatina alata

Genomic Location: :...
NR annotation: WBB44924.1, reverse transcriptase [Chrysogorgia stellata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O93209Pro-Pol polyprotein OS=Feline foamy virus OX=53182 GN=pol PE=3 SV=1
Q4U0X6Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 3 (strain Pyl43) OX=406769 GN=gag-pro-pol PE=3 SV=4
Q8BST6E3 ubiquitin-protein ligase pellino homolog 2 OS=Mus musculus OX=10090 GN=Peli2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF21524SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF14429DOCK-C2C2 domain in Dock180 and Zizimin proteinsDomainInterproscan
PF20723Pellino_RINGPellino, RING domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR048589DomainSAM domain-containing protein 1-like, WH domainInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR026791FamilyDedicator of cytokinesisInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR027007DomainC2 DOCK-type domainInterproscan
IPR006800FamilyPellino familyInterproscan
IPR048335DomainPellino, RING domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR23317DEDICATOR OF CYTOKINESIS DOCKInterproscan
PTHR12098E3 UBIQUITIN-PROTEIN LIGASE PELLINO-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0008592Biological Processregulation of Toll signaling pathwayInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06208aroH; chorismate mutaseEC:5.4.99.5
Phenylalanine, tyrosine and tryptophan biosynthesisko00400deepkoala

TOP