Detailed information of Aala_g2082.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_003382917.1, PREDICTED: ribosome biogenesis regulatory protein homolog [Amphimedon queenslandica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A8WY26Ribosome biogenesis regulatory protein homolog OS=Caenorhabditis briggsae OX=6238 GN=rrbs-1 PE=3 SV=1
Q9CYH6Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1
Q15050Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00241Cofilin_ADFCofilin/tropomyosin-type actin-binding proteinDomainInterproscan
PF03016ExostosinExostosin familyFamilyInterproscan
PF09258Glyco_transf_64Glycosyl transferase family 64 domainDomainInterproscan
PF14542Acetyltransf_CGGCN5-related N-acetyl-transferaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04939RRS1Ribosome biogenesis regulatory protein (RRS1)FamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF01652IF4EEukaryotic initiation factor 4EDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017904FamilyADF/CofilinInterproscan
IPR002108DomainActin-depolymerising factor homology domainInterproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR004263FamilyExostosin-likeInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR040911DomainExostosin, GT47 domainInterproscan
IPR015338DomainGlycosyl transferase 64 domainInterproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR031165DomainYjdj-type Gcn5-related N-acetyltransferaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR002052Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan
IPR007023FamilyRibosomal biogenesis regulatory proteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR023398Homologous_superfamilyTranslation Initiation factor eIF- 4e-likeInterproscan
IPR001040FamilyTranslation Initiation factor eIF- 4eInterproscan
IPR033467DomainTesmin/TSO1-like CXC domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11913COFILIN-RELATEDInterproscan
PTHR48261ACETYLGLUCOSAMINYLTRANSFERASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR41694ENDOGENOUS RETROVIRUS GROUP K MEMBER POL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030042Biological Processactin filament depolymerizationInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0016757Molecular Functionglycosyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000340Molecular FunctionRNA 7-methylguanosine cap bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0016281Cellular Componenteukaryotic translation initiation factor 4F complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0035613Molecular FunctionRNA stem-loop bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05765CFL; cofilin-Exosomeko04147deepkoala

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