Detailed information of Aala_g2085.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4018160.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P17225Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=3
Q00438Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=2
P26599Polypyrimidine tract-binding protein 1 OS=Homo sapiens OX=9606 GN=PTBP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12697Abhydrolase_6Alpha/beta hydrolase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13893RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan
PF11835RRM_8RRM-like domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000073DomainAlpha/beta hydrolase fold-1Interproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR040190FamilyN-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory proteinInterproscan
IPR046348Homologous_superfamilySIS domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR006536FamilyHnRNP-L/PTBInterproscan
IPR021790DomainPTBP1-like, RNA recognition motif 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46197PROTEIN ABHD14B-LIKEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR10088GLUCOKINASE REGULATORY PROTEINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004857Molecular Functionenzyme inhibitor activityInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009750Biological Processresponse to fructoseInterproscan
GO:0019899Molecular Functionenzyme bindingInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0033132Biological Processnegative regulation of glucokinase activityInterproscan
GO:0042593Biological Processglucose homeostasisInterproscan
GO:0070095Molecular Functionfructose-6-phosphate bindingInterproscan
GO:0097367Molecular Functioncarbohydrate derivative bindingInterproscan
GO:1901135Biological Processcarbohydrate derivative metabolic processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0043484Biological Processregulation of RNA splicingInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan

TOP