Gene detail

Detailed information of Aala_g2087.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028419151.1, uncharacterized protein LOC114544856 [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q07G10	tRNA (carboxymethyluridine(34)-5-O)-methyltransferase alkbh8 OS=Xenopus tropicalis OX=8364 GN=alkbh8 PE=2 SV=2
Q80Y20	tRNA (carboxymethyluridine(34)-5-O)-methyltransferase ALKBH8 OS=Mus musculus OX=10090 GN=Alkbh8 PE=1 SV=1
Q96BT7	tRNA (carboxymethyluridine(34)-5-O)-methyltransferase ALKBH8 OS=Homo sapiens OX=9606 GN=ALKBH8 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03175	DNA_pol_B_2	DNA polymerase type B, organellar and viral	Family	Interproscan
PF02945	Endonuclease_7	Recombination endonuclease VII	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14291	DUF4371	Domain of unknown function (DUF4371)	Family	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004868	Domain	DNA-directed DNA polymerase, family B, mitochondria/virus	Interproscan
IPR044925	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR004211	Family	Recombination endonuclease VII	Interproscan
IPR038563	Homologous_superfamily	Recombination endonuclease VII superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR025398	Domain	Domain of unknown function DUF4371	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511	PROTEIN CBG23764	Interproscan
PTHR13491	ZCCHC10 PROTEIN	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR33244	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR45749	-	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR33198	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan