Detailed information of Aala_g2089.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_032809586.1, activated RNA polymerase II transcriptional coactivator p15 [Petromyzon marinus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A4Z945Protein FAM200C OS=Bos taurus OX=9913 GN=FAM200C PE=2 SV=1
Q8IZ13Protein FAM200C OS=Homo sapiens OX=9606 GN=FAM200C PE=1 SV=1
A2XGQ1Nuclear/nucleolar GTPase 2 OS=Oryza sativa subsp. indica OX=39946 GN=NUG2 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyPC4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12717Cnd1non-SMC mitotic condensation complex subunit 1RepeatInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF02197RIIaRegulatory subunit of type II PKA R-subunitDomainInterproscan
PF00027cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan
PF08153NGP1NTNGP1NT (NUC091) domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02229PC4Transcriptional Coactivator p15 (PC4)DomainInterproscan
PF08669GCV_T_CGlycine cleavage T-protein C-terminal barrel domainDomainInterproscan
PF01266DAOFAD dependent oxidoreductaseDomainInterproscan
PF01571GCV_TAminomethyltransferase folate-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR026971FamilyCondensin subunit 1/Condensin-2 complex subunit D3Interproscan
IPR032682DomainCondensin complex subunit 1, C-terminalInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR003117DomaincAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domainInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR018488Conserved_siteCyclic nucleotide-binding, conserved siteInterproscan
IPR012198FamilycAMP-dependent protein kinase regulatory subunitInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR050503FamilycAMP-dependent kinase regulatory chainInterproscan
IPR012971DomainNucleolar GTP-binding protein 2, N-terminal domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR009044Homologous_superfamilyssDNA-binding transcriptional regulatorInterproscan
IPR003173DomainTranscriptional coactivator p15 (PC4), C-terminalInterproscan
IPR045125FamilyRNA polymerase II transcriptional coactivator Sub1/Tcp4-likeInterproscan
IPR013977DomainGlycine cleavage T-protein, C-terminal barrel domainInterproscan
IPR029043Homologous_superfamilyGlycine cleavage T-protein/YgfZ, C-terminalInterproscan
IPR027266Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan
IPR006076DomainFAD dependent oxidoreductaseInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR006222DomainAminomethyltransferase, folate-binding domainInterproscan
IPR028896FamilyAminomethyltransferase-likeInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14222CONDENSINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11635CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORInterproscan
PTHR43757AMINOMETHYLTRANSFERASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000779Cellular Componentcondensed chromosome, centromeric regionInterproscan
GO:0000799Cellular Componentcondensin complexInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0010032Biological Processmeiotic chromosome condensationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0001932Biological Processregulation of protein phosphorylationInterproscan
GO:0005952Cellular ComponentcAMP-dependent protein kinase complexInterproscan
GO:0008603Molecular FunctioncAMP-dependent protein kinase regulator activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0060261Biological Processpositive regulation of transcription initiation by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04739PRKAR; cAMP-dependent protein kinase regulator-Insulin signaling pathwayko04910deepkoala

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