Detailed information of Aala_g2100.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020631238.1, uncharacterized protein LOC110068200 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q87NG3Glycine betaine transporter 1 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1905 PE=1 SV=1
Q87PP5Glycine betaine/proline/choline/ectoine transporter VP1456 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1456 PE=1 SV=1
Q87NZ5Glycine betaine/proline/choline transporter VP1723 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1723 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF04886PTPT repeatRepeatInterproscan
PF12762DDE_Tnp_IS1595ISXO2-like transposase domainDomainInterproscan
PF20481DUF6721Domain of unknown function (DUF6721)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF14656RAB3GAP2_CRab3 GTPase-activating protein regulatory subunit C-terminusFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02028BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan
PF04749PLAC8PLAC8 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR006970RepeatPT repeatInterproscan
IPR051412FamilyFormin Homology Diaphanous subfamilyInterproscan
IPR024445DomainISXO2-like transposase domainInterproscan
IPR053164FamilyIS1016-like transposaseInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR046567DomainLysostaphin, N-terminal domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR029257DomainRab3GAP regulatory subunit, C-terminalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000060FamilyBCCT transporter familyInterproscan
IPR006461FamilyPLAC8 motif-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR36489PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATEDInterproscan
PTHR45691PROTEIN DIAPHANOUSInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR47163DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR30047HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0030041Biological Processactin filament polymerizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705Biological Processnitrogen compound transportInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006810Biological ProcesstransportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23222HARBI1; nuclease HARBI1EC:3.1.-.-
Chromosome and associated proteinsko03036deepkoala

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