Detailed information of Aala_g2108.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP4268470.1, GIY-YIG nuclease family protein [Candidatus Brocadiaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9HD20Endoplasmic reticulum transmembrane helix translocase OS=Homo sapiens OX=9606 GN=ATP13A1 PE=1 SV=2
Q9EPE9Endoplasmic reticulum transmembrane helix translocase OS=Mus musculus OX=10090 GN=Atp13a1 PE=1 SV=2
P90747Probable manganese-transporting ATPase catp-8 OS=Caenorhabditis elegans OX=6239 GN=catp-8 PE=3 SV=3
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00293NUDIXNUDIX domainDomainInterproscan
PF12838Fer4_74Fe-4S dicluster domainDomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF10431ClpB_D2-smallC-terminal, D2-small domain, of ClpB protein DomainInterproscan
PF00122E1-E2_ATPaseE1-E2 ATPaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015797Homologous_superfamilyNUDIX hydrolase-like domain superfamilyInterproscan
IPR000086DomainNUDIX hydrolase domainInterproscan
IPR017900Conserved_site4Fe-4S ferredoxin, iron-sulphur binding, conserved siteInterproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR010226FamilyNADH-quinone oxidoreductase, chain IInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR050052FamilyATP-dependent Clp protease ATP-binding subunit ClpXInterproscan
IPR019489DomainClp ATPase, C-terminalInterproscan
IPR008250Homologous_superfamilyP-type ATPase, A domain superfamilyInterproscan
IPR006544FamilyP-type ATPase, subfamily VInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10849NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIALInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR48102ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATEDInterproscan
PTHR45630CATION-TRANSPORTING ATPASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016651Molecular Functionoxidoreductase activity, acting on NAD(P)HInterproscan
GO:0051539Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0003954Molecular FunctionNADH dehydrogenase activityInterproscan
GO:0005747Cellular Componentobsolete mitochondrial respiratory chain complex IInterproscan
GO:0006120Biological Processmitochondrial electron transport, NADH to ubiquinoneInterproscan
GO:0009060Biological Processaerobic respirationInterproscan
GO:0032981Biological Processmitochondrial respiratory chain complex I assemblyInterproscan
GO:0045272Cellular Componentobsolete plasma membrane respiratory chain complex IInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0006874Biological Processintracellular calcium ion homeostasisInterproscan
GO:0015662Molecular FunctionP-type ion transporter activityInterproscan
GO:0019829Molecular FunctionATPase-coupled monoatomic cation transmembrane transporter activityInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140358Molecular FunctionP-type transmembrane transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03941NDUFS8; NADH dehydrogenase (ubiquinone) Fe-S protein 8EC:7.1.1.2
Enzymes with EC numbers-deepkoala
Non-alcoholic fatty liver diseaseko04932deepkoala

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