Gene detail

Detailed information of Aala_g2118.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8023855.1, hypothetical protein HOLleu_36416 [Holothuria leucospilota]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
Q94HW2	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF13976	gag_pre-integrs	GAG-pre-integrase domain	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF08412	Ion_trans_N	Ion transport protein N-terminal	Family	Interproscan
PF00014	Kunitz_BPTI	Kunitz/Bovine pancreatic trypsin inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR025724	Domain	GAG-pre-integrase domain	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR001506	Domain	Peptidase M12A	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR013621	Domain	Ion transport N-terminal	Interproscan
IPR036880	Homologous_superfamily	Pancreatic trypsin inhibitor Kunitz domain superfamily	Interproscan
IPR002223	Domain	Pancreatic trypsin inhibitor Kunitz domain	Interproscan
IPR050098	Family	Kunitz-type Serine Protease Inhibitor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22878	UNCHARACTERIZED	Interproscan
PTHR10083	KUNITZ-TYPE PROTEASE INHIBITOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0004867	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10576	UBE2H, UBC8; ubiquitin-conjugating enzyme E2 H	EC:2.3.2.23	Ubiquitin system	ko04121	deepkoala