Detailed information of Aala_g2123.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4035798.1, Hypothetical predicted protein, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9EQU5Protein SET OS=Mus musculus OX=10090 GN=Set PE=1 SV=1
Q63945Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2
Q01105Protein SET OS=Homo sapiens OX=9606 GN=SET PE=1 SV=3
Gene familySubfamily
Transcription Factors Familyzf-BED

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00956NAPNucleosome assembly protein (NAP)FamilyInterproscan
PF02892zf-BEDBED zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR037231Homologous_superfamilyNAP-like superfamilyInterproscan
IPR002164FamilyNucleosome assembly protein (NAP)Interproscan
IPR052717FamilyVacuolar processing and transposase activity regulatorsInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11875TESTIS-SPECIFIC Y-ENCODED PROTEINInterproscan
PTHR46169DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10356MYO1; myosin I-Exosomeko04147deepkoala

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