Detailed information of Aala_g2124.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4022680.1, Retrovirus-related Pol poly from transposon TNT 1-94 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
O75665Centriole and centriolar satellite protein OFD1 OS=Homo sapiens OX=9606 GN=OFD1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF16045LisH_2LisHDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR006594Conserved_siteLIS1 homology motifInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR39063ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOGInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR24543MULTICOPPER OXIDASE-RELATEDInterproscan
PTHR34718PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0060287Biological Processepithelial cilium movement involved in determination of left/right asymmetryInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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