Detailed information of Aala_g2125.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF0980581.1, unnamed protein product [Brachionus calyciflorus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55037Ferredoxin-dependent glutamate synthase 1 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=gltB PE=1 SV=1
Q61555Fibrillin-2 OS=Mus musculus OX=10090 GN=Fbn2 PE=1 SV=2
P35556Fibrillin-2 OS=Homo sapiens OX=9606 GN=FBN2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07984NTP_transf_7Nucleotidyltransferase DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00439BromodomainBromodomainDomainInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF15009TMEM173Transmembrane protein 173FamilyInterproscan
PF13180PDZ_2PDZ domainDomainInterproscan
PF00310GATase_2Glutamine amidotransferases class-IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR012937FamilyTerminal nucleotidyltransferaseInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR051145FamilyGrowth Arrest-Specific/Sex Hormone-Binding/Vitamin K-DependentInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR001487DomainBromodomainInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR040240FamilyTranscription initiation factor TFIID subunit 1Interproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR038623Homologous_superfamilyStimulator of interferon genes protein, C-terminal domain superfamilyInterproscan
IPR029158FamilyStimulator of interferon genes proteinInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR017932DomainGlutamine amidotransferase type 2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR12974PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR24040LAMININ G-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan
PTHR46880RAS-ASSOCIATING DOMAIN-CONTAINING PROTEINInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR34339STIMULATOR OF INTERFERON GENES PROTEINInterproscan
PTHR24075SEC63 DOMAIN-CONTAININGInterproscan
PTHR22939SERINE PROTEASE FAMILY S1C HTRA-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0048255Biological ProcessmRNA stabilizationInterproscan
GO:1990817Molecular Functionpoly(A) RNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan
GO:0016925Biological Processprotein sumoylationInterproscan
GO:0061665Molecular FunctionSUMO ligase activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:0002218Biological Processactivation of innate immune responseInterproscan
GO:0032481Biological Processpositive regulation of type I interferon productionInterproscan
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0016239Biological Processpositive regulation of macroautophagyInterproscan
GO:0035438Molecular Functioncyclic-di-GMP bindingInterproscan
GO:0045087Biological Processinnate immune responseInterproscan
GO:0061507Molecular Function2',3'-cyclic GMP-AMP bindingInterproscan
GO:0061709Biological ProcessreticulophagyInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0006620Biological Processpost-translational protein targeting to endoplasmic reticulum membraneInterproscan
GO:0008320Molecular Functionprotein transmembrane transporter activityInterproscan
GO:0031207Cellular ComponentSec62/Sec63 complexInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0012501Biological Processprogrammed cell deathInterproscan
GO:0043065Biological Processpositive regulation of apoptotic processInterproscan

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