Gene detail

Detailed information of Aala_g2127.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP3661021.1, DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P04146	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
Q6DEE7	Protein FAM76B OS=Xenopus laevis OX=8355 GN=fam76b PE=2 SV=1
Q566M1	Protein FAM76B OS=Xenopus tropicalis OX=8364 GN=fam76b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10545	MADF_DNA_bdg	Alcohol dehydrogenase transcription factor Myb/SANT-like	Domain	Interproscan
PF16046	FAM76	FAM76 protein	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR039353	Family	Transcription factor Adf-1	Interproscan
IPR006578	Domain	MADF domain	Interproscan
IPR032017	Family	FAM76 protein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR12243	MADF DOMAIN TRANSCRIPTION FACTOR	Interproscan
PTHR46176	LD21662P	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0016607	Cellular Component	nuclear speck	Interproscan