Detailed information of Aala_g2145.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015747384.1, PREDICTED: CAP-Gly domain-containing linker protein 1-like, partial [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P30622CAP-Gly domain-containing linker protein 1 OS=Homo sapiens OX=9606 GN=CLIP1 PE=1 SV=2
Q9JK25CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2
Q922J3CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04949Transcrip_actTranscriptional activatorFamilyInterproscan
PF16641CLIP1_ZNFCLIP1 zinc knuckleFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007033FamilyRAB6-interacting golginInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR032108DomainCLIP1, zinc knuckleInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35846PROTEIN CBG05131Interproscan
PTHR21470RAB6-INTERACTING PROTEIN GORABInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:1905515Biological Processnon-motile cilium assemblyInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21812E5; Alphapapillomavirus protein E5-Membrane traffickingko04131deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Viral proteinsko03200deepkoala

TOP