Detailed information of Aala_g2154.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_018378495.1, PREDICTED: uncharacterized protein LOC108771089 isoform X1 [Trachymyrmex cornetzi]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O96552Charged multivesicular body protein 1 OS=Dictyostelium discoideum OX=44689 GN=chmp1 PE=3 SV=1
Q6DF27Charged multivesicular body protein 1b OS=Xenopus tropicalis OX=8364 GN=chmp1b PE=2 SV=1
Q7SZB5Charged multivesicular body protein 1b OS=Xenopus laevis OX=8355 GN=chmp1b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14244Retrotran_gag_3gag-polypeptide of LTR copia-typeFamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR005024FamilySnf7 familyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029472DomainRetrotransposon Copia-like, N-terminalInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45749-Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR10476CHARGED MULTIVESICULAR BODY PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47481-Interproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0000815Cellular ComponentESCRT III complexInterproscan
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0007034Biological Processvacuolar transportInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0032509Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0045324Biological Processlate endosome to vacuole transportInterproscan

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