Detailed information of Aala_g2158.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_013414654.1, uncharacterized protein LOC106176709 [Lingula anatina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D0R4Probable ATP-dependent RNA helicase DDX56 OS=Mus musculus OX=10090 GN=Ddx56 PE=1 SV=1
Q9NY93Probable ATP-dependent RNA helicase DDX56 OS=Homo sapiens OX=9606 GN=DDX56 PE=1 SV=1
Q3SZ40Probable ATP-dependent RNA helicase DDX56 OS=Bos taurus OX=9913 GN=DDX56 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00225KinesinKinesin motor domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF14893PNMAPNMAFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR027640FamilyKinesin-like proteinInterproscan
IPR001752DomainKinesin motor domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24115KINESIN-RELATEDInterproscan
PTHR24020COLLAGEN ALPHAInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45749-Interproscan
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR33064POL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003777Molecular Functionmicrotubule motor activityInterproscan
GO:0005871Cellular Componentkinesin complexInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14810DDX56, DBP9; ATP-dependent RNA helicase DDX56/DBP9EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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