Gene detail

Detailed information of Aala_g2159.t1 in Alatina alata

Genomic Location: :...
NR annotation: WP_217349047.1, hypothetical protein, partial [Solemya elarraichensis gill symbiont]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P53995	Anaphase-promoting complex subunit 1 OS=Mus musculus OX=10090 GN=Anapc1 PE=1 SV=2
Q9H1A4	Anaphase-promoting complex subunit 1 OS=Homo sapiens OX=9606 GN=ANAPC1 PE=1 SV=1
Q8N328	PiggyBac transposable element-derived protein 3 OS=Homo sapiens OX=9606 GN=PGBD3 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03732	Retrotrans_gag	Retrotransposon gag protein	Family	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024990	Family	Anaphase-promoting complex subunit 1	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR005162	Domain	Retrotransposon gag domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR014010	Domain	REJ domain	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR052638	Family	PiggyBac transposable element-derived	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12827	MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47055	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005680	Cellular Component	anaphase-promoting complex	Interproscan
GO:0007091	Biological Process	metaphase/anaphase transition of mitotic cell cycle	Interproscan
GO:0031145	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan
GO:0070979	Biological Process	protein K11-linked ubiquitination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03075	secG; preprotein translocase subunit SecG	-	Secretion system	ko02044	deepkoala