Gene detail

Detailed information of Aala_g216.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015769848.1, PREDICTED: uncharacterized protein K02A2.6-like [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7TD08	Enzymatic polyprotein OS=Cestrum yellow leaf curling virus OX=175814 GN=ORF V PE=3 SV=1
P15629	Enzymatic polyprotein OS=Soybean chlorotic mottle virus OX=10651 GN=ORF V PE=3 SV=2
P14350	Pro-Pol polyprotein OS=Human spumaretrovirus OX=11963 GN=pol PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013	KH_1	KH domain	Domain	Interproscan
PF00538	Linker_histone	linker histone H1 and H5 family	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR005818	Domain	Linker histone H1/H5, domain H15	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036572	Homologous_superfamily	Doublecortin domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15272	CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR45749	-	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR45134	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006334	Biological Process	nucleosome assembly	Interproscan
GO:0033186	Cellular Component	CAF-1 complex	Interproscan
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11275	H1_5; histone H1/5	-	Ribosome	ko03011	deepkoala
			Domain-containing proteins not elsewhere classified	ko04990	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala