Gene detail

Detailed information of Aala_g2179.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCG7882886.1, hypothetical protein [Candidatus Thiodiazotropha endolucinida]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02536	mTERF	mTERF	Family	Interproscan
PF00612	IQ	IQ calmodulin-binding motif	Motif	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003690	Family	Transcription termination factor, mitochondrial/chloroplastic	Interproscan
IPR038538	Homologous_superfamily	MTERF superfamily, mitochondrial/chloroplastic	Interproscan
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR46114	APPLE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR15437	TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL	Interproscan
PTHR23335	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006393	Biological Process	termination of mitochondrial transcription	Interproscan
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15031	MTERF; mitochondrial transcription termination factor family protein	-	Transcription	-	deepkoala
K15031		-	Mitochondrial biogenesis	ko03029	deepkoala