Gene detail

Detailed information of Aala_g2180.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047141756.1, ribosomal protein S6 kinase beta-1 isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P23443	Ribosomal protein S6 kinase beta-1 OS=Homo sapiens OX=9606 GN=RPS6KB1 PE=1 SV=2
Q8BSK8	Ribosomal protein S6 kinase beta-1 OS=Mus musculus OX=10090 GN=Rps6kb1 PE=1 SV=2
P67998	Ribosomal protein S6 kinase beta-1 OS=Oryctolagus cuniculus OX=9986 GN=RPS6KB1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00433	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan
PF13936	HTH_38	Helix-turn-helix domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR002343	Family	Paraneoplastic encephalomyelitis antigen	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR017892	Domain	Protein kinase, C-terminal	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR025246	Domain	Transposase IS30-like HTH domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10356	MYO1; myosin I	-	Spliceosome	ko03041	deepkoala
			Transfer RNA biogenesis	ko03016	deepkoala
			Exosome	ko04147	deepkoala