Gene detail

Detailed information of Aala_g219.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044174604.1, uncharacterized protein LOC122958137 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q66HW4	Glycosylated lysosomal membrane protein OS=Danio rerio OX=7955 GN=glmp PE=2 SV=1
A8WH34	Glycosylated lysosomal membrane protein B OS=Xenopus laevis OX=8355 GN=glmp-b PE=2 SV=2
Q6AX53	Glycosylated lysosomal membrane protein A OS=Xenopus laevis OX=8355 GN=glmp-a PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07928	Vps54	Vps54-like protein	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF15065	NCU-G1	Lysosomal transcription factor, NCU-G1	Family	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012501	Domain	Vacuolar protein sorting-associated protein 54, C-terminal	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR029382	Family	Lysosomal transcription factor, NCU-G1	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR050848	Family	Homeobox domain-containing transcription factors	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR45749	-	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR31981	GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24333	HOMEO BOX HB9 LIKE A-RELATED	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0042147	Biological Process	retrograde transport, endosome to Golgi	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005764	Cellular Component	lysosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09303	HOX_3; homeobox protein HoxA/B/D3	-	Transcription factors	ko03000	deepkoala