Gene detail

Detailed information of Aala_g2193.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_014345478.1, PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC102362595 [Latimeria chalumnae]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
D2HNY3	Fanconi-associated nuclease 1 OS=Ailuropoda melanoleuca OX=9646 GN=FAN1 PE=3 SV=2
Q1LWH4	Fanconi-associated nuclease 1 OS=Danio rerio OX=7955 GN=fan1 PE=2 SV=2
Q69ZT1	Fanconi-associated nuclease 1 OS=Mus musculus OX=10090 GN=Fan1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF08774	VRR_NUC	VRR-NUC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR052338	Family	Transposase_5	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000515	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan
IPR033315	Family	Fanconi-associated nuclease 1-like	Interproscan
IPR011856	Homologous_superfamily	tRNA endonuclease-like domain superfamily	Interproscan
IPR014883	Domain	VRR-NUC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23022	TRANSPOSABLE ELEMENT-RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR15749	FANCONI-ASSOCIATED NUCLEASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008409	Molecular Function	5'-3' exonuclease activity	Interproscan
GO:0017108	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0036297	Biological Process	interstrand cross-link repair	Interproscan
GO:0070336	Molecular Function	flap-structured DNA binding	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan