Detailed information of Aala_g2196.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH2104114.1, unnamed protein product [Euphydryas editha]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q03274Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1
Q96JS3PiggyBac transposable element-derived protein 1 OS=Homo sapiens OX=9606 GN=PGBD1 PE=1 SV=1
Q99KC8von Willebrand factor A domain-containing protein 5A OS=Mus musculus OX=10090 GN=Vwa5a PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF08487VITVault protein inter-alpha-trypsin domainFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF13873Myb_DNA-bind_5Myb/SANT-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000358FamilyRibonucleotide reductase small subunit familyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013694DomainVIT domainInterproscan
IPR052638FamilyPiggyBac transposable element-derivedInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR028002DomainMyb/SANT-like DNA-binding domain 5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23409RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR45737VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5AInterproscan
PTHR47055DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR23098AGAP001331-PA-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

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