Detailed information of Aala_g2210.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028405783.1, uncharacterized protein LOC114528362 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9DE13Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus gallus OX=9031 GN=BAZ2B PE=2 SV=1
P21574Y-box-binding protein 2-A OS=Xenopus laevis OX=8355 GN=ybx2-a PE=1 SV=3
B5DE31Y-box-binding protein 1 OS=Danio rerio OX=7955 GN=ybx1 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyCSD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan
PF14893PNMAPNMAFamilyInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF02752Arrestin_CArrestin (or S-antigen), C-terminal domainDomainInterproscan
PF00339Arrestin_NArrestin (or S-antigen), N-terminal domainDomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR050181FamilyCold shock domain-containing proteinInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR011129DomainCold shock domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR011022DomainArrestin C-terminal-like domainInterproscan
IPR014752Homologous_superfamilyArrestin-like, C-terminalInterproscan
IPR011021DomainArrestin-like, N-terminalInterproscan
IPR050357FamilyArrestin domain-containing proteinInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11544COLD SHOCK DOMAIN CONTAINING PROTEINSInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11188ARRESTIN DOMAIN CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45915TRANSCRIPTION INTERMEDIARY FACTORInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan

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