Detailed information of Aala_g2215.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3994184.1, Retrovirus-related Pol poly from transposon opus [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q03278Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05454DAG1Dystroglycan (Dystrophin-associated glycoprotein 1)FamilyInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000366FamilyGPCR fungal pheromone mating factor, STE2Interproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR006644DomainDystroglycan-type cadherin-likeInterproscan
IPR008465DomainDystroglycan, C-terminalInterproscan
IPR030398DomainDG-type SEA domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR21559DYSTROGLYCAN-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004932Molecular Functionmating-type factor pheromone receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016010Cellular Componentdystrophin-associated glycoprotein complexInterproscan
GO:0002009Biological Processmorphogenesis of an epitheliumInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0016011Cellular Componentdystroglycan complexInterproscan
GO:0016203Biological Processmuscle attachmentInterproscan
GO:0021675Biological Processnerve developmentInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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