Detailed information of Aala_g2217.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_012555087.2, inverted formin-2 isoform X6 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
Q8R050Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03055RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR052671FamilyAcrosomal SP-10-likeInterproscan
IPR007244Family-alpha-acetyltransferase 35, NatC auxiliary subunitInterproscan
IPR004294FamilyCarotenoid oxygenaseInterproscan
IPR027649FamilyInverted formin-2Interproscan
IPR042201Homologous_superfamilyFormin, FH2 domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR050100FamilyTranslation factor GTPase superfamily membersInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR17571URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10Interproscan
PTHR21373GLUCOSE REPRESSIBLE PROTEIN MAK10Interproscan
PTHR10543BETA-CAROTENE DIOXYGENASEInterproscan
PTHR46345INVERTED FORMIN-2Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR23115TRANSLATION FACTORInterproscan
PTHR47481-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006474Biological ProcessN-terminal protein amino acid acetylationInterproscan
GO:0017196Biological ProcessN-terminal peptidyl-methionine acetylationInterproscan
GO:0031417Cellular ComponentNatC complexInterproscan
GO:0003834Molecular Functionbeta-carotene 15,15'-dioxygenase activityInterproscan
GO:0004744Molecular Functionobsolete retinal isomerase activityInterproscan
GO:0010436Molecular Functioncarotenoid dioxygenase activityInterproscan
GO:0016121Biological Processcarotene catabolic processInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003747Molecular Functiontranslation release factor activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0018444Cellular Componenttranslation release factor complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22817NSMCE1, NSE1; non-structural maintenance of chromosomes element 1EC:2.3.2.27
DNA repair and recombination proteinsko03400deepkoala

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