Gene detail

Detailed information of Aala_g2222.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047123570.1, protocadherin Fat 4 isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q80X19	Collagen alpha-1(XIV) chain OS=Mus musculus OX=10090 GN=Col14a1 PE=1 SV=2
Q05707	Collagen alpha-1(XIV) chain OS=Homo sapiens OX=9606 GN=COL14A1 PE=1 SV=3
P32018	Collagen alpha-1(XIV) chain OS=Gallus gallus OX=9031 GN=COL14A1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00077	RVP	Retroviral aspartyl protease	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR053134	Family	RNA-directed DNA polymerase homolog	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR034132	Domain	Retropepsin Saci-like domain	Interproscan
IPR018061	Domain	Retropepsins	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR050525	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	Interproscan
PTHR24020	COLLAGEN ALPHA	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11126	TERT, EST2; telomerase reverse transcriptase	EC:2.7.7.49	DNA replication proteins	ko03032	deepkoala