Detailed information of Aala_g2235.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_033097430.1, uncharacterized protein LOC117101556 [Anneissia japonica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q68FW8Bridging integrator 3 OS=Rattus norvegicus OX=10116 GN=Bin3 PE=2 SV=1
P01110Viral myc transforming protein OS=Avian myelocytomatosis virus 29 OX=11868 GN=MYC PE=3 SV=2
Q90341Transcriptional regulator Myc-1 OS=Cyprinus carpio OX=7962 GN=myca PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF08393DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03114BARBAR domainDomainInterproscan
PF01798NopsnoRNA binding domain, fibrillarinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR050149FamilyCollagen superfamilyInterproscan
IPR042222Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR013602DomainDynein heavy chain, linkerInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050433FamilyMyc family transcription factorsInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR050372FamilyNeurexin-related cell adhesion and synaptic proteinInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR004148DomainBAR domainInterproscan
IPR046982FamilyBridging integrator 3/RVS161-likeInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR042239Homologous_superfamilyNop, C-terminal domainInterproscan
IPR002687DomainNop domainInterproscan
IPR036070Homologous_superfamilyNop domain superfamilyInterproscan
IPR045056FamilyNucleolar protein Nop56/Nop58Interproscan
IPR036716Homologous_superfamilyPesticidal crystal protein, N-terminal domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan
PTHR45851MYC PROTO-ONCOGENEInterproscan
PTHR15036PIKACHURIN-LIKE PROTEINInterproscan
PTHR23051SOLUTE CARRIER FAMILY 35, MEMBER F5Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47174BRIDGING INTEGRATOR 3Interproscan
PTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58Interproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030020Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0030479Cellular Componentactin cortical patchInterproscan
GO:0051666Biological Processactin cortical patch localizationInterproscan
GO:0097320Biological Processplasma membrane tubulationInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0031428Cellular Componentbox C/D methylation guide snoRNP complexInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0090729Molecular Functiontoxin activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02419fliP; flagellar biosynthesis protein FliP-Membrane traffickingko04131deepkoala
Messenger RNA biogenesisko03019deepkoala
Bacterial motility proteinsko02035deepkoala

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