Detailed information of Aala_g224.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_012563416.1, unnamed protein product [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3TBD2Rho GTPase-activating protein 45 OS=Mus musculus OX=10090 GN=Arhgap45 PE=1 SV=2
Q92619Rho GTPase-activating protein 45 OS=Homo sapiens OX=9606 GN=ARHGAP45 PE=1 SV=2
Q5RB40Rho GTPase-activating protein 45 OS=Pongo abelii OX=9601 GN=ARHGAP45 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan
PF00773RNBRNB domainDomainInterproscan
PF17877Dis3l2_C_termDIS3-like exonuclease 2 C terminalDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR033583FamilyBEN domain-containing protein 3Interproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR018379DomainBEN domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR041093DomainDIS3-like exonuclease 2, C-terminalInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR014010DomainREJ domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR051025FamilyRho GTPase-activatingInterproscan
IPR000998DomainMAM domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR052638FamilyPiggyBac transposable element-derivedInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR28665BEN DOMAIN-CONTAINING PROTEIN 3Interproscan
PTHR23355RIBONUCLEASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR15228SPERMATHECAL PHYSIOLOGY VARIANTInterproscan
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan
PTHR47055DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000183Biological ProcessrDNA heterochromatin formationInterproscan
GO:0000792Cellular ComponentheterochromatinInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0010587Biological ProcessmiRNA catabolic processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

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