Detailed information of Aala_g2252.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4043825.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8VIG2Meiosis regulator and mRNA stability factor 1 OS=Rattus norvegicus OX=10116 GN=Marf1 PE=1 SV=2
Q8BJ34Meiosis regulator and mRNA stability factor 1 OS=Mus musculus OX=10090 GN=Marf1 PE=1 SV=3
Q9Y4F3Meiosis regulator and mRNA stability factor 1 OS=Homo sapiens OX=9606 GN=MARF1 PE=1 SV=6
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF01936NYNNYN domainDomainInterproscan
PF11608MARF1_RRM1MARF1, RNA recognition motif 1DomainInterproscan
PF02781G6PD_CGlucose-6-phosphate dehydrogenase, C-terminal domainDomainInterproscan
PF00479G6PD_NGlucose-6-phosphate dehydrogenase, NAD binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR024768FamilyMeiosis regulator and mRNA stability factor 1Interproscan
IPR021139DomainNYN domainInterproscan
IPR034189DomainMARF1, RNA recognition motif 1Interproscan
IPR022675DomainGlucose-6-phosphate dehydrogenase, C-terminalInterproscan
IPR001282FamilyGlucose-6-phosphate dehydrogenaseInterproscan
IPR019796Active_siteGlucose-6-phosphate dehydrogenase, active siteInterproscan
IPR022674DomainGlucose-6-phosphate dehydrogenase, NAD-bindingInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan
PTHR14379LIMKAIN B LKAPInterproscan
PTHR23429GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:1905762Molecular FunctionCCR4-NOT complex bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0004345Molecular Functionglucose-6-phosphate dehydrogenase activityInterproscan
GO:0006006Biological Processglucose metabolic processInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0016614Molecular Functionoxidoreductase activity, acting on CH-OH group of donorsInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0009051Biological Processpentose-phosphate shunt, oxidative branchInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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