Gene detail

Detailed information of Aala_g2265.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1712187.1, Conserved oligomeric Golgi complex subunit 6 [Nymphon striatum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q05118	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR051070	Family	NF-kappa-B Inhibitor	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR051246	Family	WD repeat-containing protein 48	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46880	RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR46680	NF-KAPPA-B INHIBITOR ALPHA	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR47272	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19862	WD REPEAT-CONTAINING PROTEIN 48	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0007253	Biological Process	cytoplasmic sequestering of NF-kappaB	Interproscan
GO:0051059	Molecular Function	NF-kappaB binding	Interproscan
GO:0071356	Biological Process	cellular response to tumor necrosis factor	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan