Detailed information of Aala_g2270.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_046423404.1, transcription initiation factor TFIID subunit 10-like isoform X2 [Neodiprion fabricii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12962Transcription initiation factor TFIID subunit 10 OS=Homo sapiens OX=9606 GN=TAF10 PE=1 SV=1
Q8K0H5Transcription initiation factor TFIID subunit 10 OS=Mus musculus OX=10090 GN=Taf10 PE=1 SV=1
Q9U5W9Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster OX=7227 GN=Taf10 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03540TFIID_30kDaTranscription initiation factor TFIID 23-30kDa subunitFamilyInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR003923FamilyTranscription initiation factor TFIID, 23-30kDa subunitInterproscan
IPR052109FamilySerine/Arginine Repetitive Matrix Domain-Containing ProteinInterproscan
IPR006578DomainMADF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21242TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10Interproscan
PTHR34755SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:1990841Molecular Functionpromoter-specific chromatin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16743ASPM, ASP; abnormal spindle-like microcephaly-associated protein-Chromosome and associated proteinsko03036deepkoala

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