Gene detail

Detailed information of Aala_g2278.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_023650930.1, uncharacterized protein LOC111835164 [Paramormyrops kingsleyae]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8N328	PiggyBac transposable element-derived protein 3 OS=Homo sapiens OX=9606 GN=PGBD3 PE=1 SV=3
P0DP91	Chimeric ERCC6-PGBD3 protein OS=Homo sapiens OX=9606 GN=ERCC6 PE=1 SV=1
Q2KIW6	26S proteasome regulatory subunit 10B OS=Bos taurus OX=9913 GN=PSMC6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014010	Domain	REJ domain	Interproscan
IPR037545	Domain	Tripartite DENN domain, FNIP1/2-type	Interproscan
IPR031160	Domain	F-BAR domain	Interproscan
IPR005819	Family	Linker histone H1/H5	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR028846	Family	Recoverin family	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan
PTHR36489	PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED	Interproscan
PTHR23055	CALCIUM BINDING PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006334	Biological Process	nucleosome assembly	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan