Detailed information of Aala_g2279.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1704766.1, hypothetical protein GQR58_003952 [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O95935T-box transcription factor TBX18 OS=Homo sapiens OX=9606 GN=TBX18 PE=1 SV=3
Q9EPZ6T-box transcription factor TBX18 OS=Mus musculus OX=10090 GN=Tbx18 PE=1 SV=1
Q96SF7T-box transcription factor TBX15 OS=Homo sapiens OX=9606 GN=TBX15 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHMG
Transcription Factors FamilyT-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF15511CENP-T_CCentromere kinetochore component CENP-T histone foldDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF00907T-boxT-boxDomainInterproscan
PF00153Mito_carrMitochondrial carrier proteinRepeatInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000217FamilyTubulinInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR002967FamilyDelta tubulinInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR001951FamilyHistone H4Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR035425DomainCENP-T/Histone H4, histone foldInterproscan
IPR019809Conserved_siteHistone H4, conserved siteInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR023395Homologous_superfamilyMitochondrial carrier domain superfamilyInterproscan
IPR018108RepeatMitochondrial substrate/solute carrierInterproscan
IPR002067FamilyMitochondrial carrier proteinInterproscan
IPR049562FamilySolute carrier family 25 member 33/36-likeInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10484HISTONE H4Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45829MITOCHONDRIAL CARRIER PROTEIN RIM2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0000070Biological Processmitotic sister chromatid segregationInterproscan
GO:0000212Biological Processmeiotic spindle organizationInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000930Cellular Componentgamma-tubulin complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005819Cellular ComponentspindleInterproscan
GO:0007020Biological Processmicrotubule nucleationInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0000002Biological Processmitochondrial genome maintenanceInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0015218Molecular Functionpyrimidine nucleotide transmembrane transporter activityInterproscan
GO:1990519Biological Processpyrimidine nucleotide import into mitochondrionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11254H4; histone H4-DNA replication proteinsko03032deepkoala
Transportersko02000deepkoala
Chromosome and associated proteinsko03036deepkoala

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