Detailed information of Aala_g2281.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCH2406050.1, reverse transcriptase family protein [Nitrosopumilus sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q10126Putative uncharacterized transposon-derived protein F52C9.6 OS=Caenorhabditis elegans OX=6239 GN=F52C9.6 PE=5 SV=1
P47897Glutamine--tRNA ligase OS=Homo sapiens OX=9606 GN=QARS1 PE=1 SV=1
Q8BML9Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF04558tRNA_synt_1c_R1Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00066NotchLNR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002119FamilyHistone H2AInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR007639DomainGlutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminalInterproscan
IPR042558Homologous_superfamilyGlutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 1Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR044925Homologous_superfamilyHis-Me finger superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000800DomainNotch domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23430HISTONE H2AInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33064POL PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR31511PROTEIN CBG23764Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11251H2A; histone H2A-Exosomeko04147deepkoala

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