Detailed information of Aala_g2282.t1 in Alatina alata

Genomic Location: :...
NR annotation: OAF71883.1, Voltage-dependent L-type calcium channel subunit alpha-1S [Intoshia linei]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P22316Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1 OS=Cyprinus carpio OX=7962 PE=2 SV=1
Q25452Muscle calcium channel subunit alpha-1 OS=Musca domestica OX=7370 PE=2 SV=1
O57483Voltage-dependent L-type calcium channel subunit alpha-1S OS=Aquarana catesbeiana OX=8400 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF17857AAA_lid_1AAA+ lid domainDomainInterproscan
PF12775AAA_7P-loop containing dynein motor regionDomainInterproscan
PF12777MTMicrotubule-binding stalk of dynein motorDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011025Homologous_superfamilyG protein alpha subunit, helical insertionInterproscan
IPR002077FamilyVoltage-dependent calcium channel, alpha-1 subunitInterproscan
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR005821DomainIon transport domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR039190FamilyTetratricopeptide repeat protein 14Interproscan
IPR041589DomainDynein heavy chain 3, AAA+ lid domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024743DomainDynein heavy chain, coiled coil stalkInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR000558FamilyHistone H2BInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37409RIKEN CDNA D130052B06 GENEInterproscan
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR23184TETRATRICOPEPTIDE REPEAT PROTEIN 14Interproscan
PTHR45703DYNEIN HEAVY CHAINInterproscan
PTHR23428HISTONE H2BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0005245Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11252H2B; histone H2B-DNA repair and recombination proteinsko03400deepkoala
Exosomeko04147deepkoala

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