Detailed information of Aala_g23.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002431228.1, ubiquitin ligase protein MIB2, putative [Pediculus humanus corporis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZIJ9E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus OX=9031 GN=MIB2 PE=2 SV=1
Q96AX9E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens OX=9606 GN=MIB2 PE=1 SV=4
Q68LP1E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus OX=10116 GN=Mib2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07731Cu-oxidase_2Multicopper oxidaseDomainInterproscan
PF00394Cu-oxidaseMulticopper oxidaseDomainInterproscan
PF00017SH2SH2 domainDomainInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00075RNase_HRNase HDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR050236FamilySerine/threonine-protein kinases, AGCInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR008972Homologous_superfamilyCupredoxinInterproscan
IPR045087FamilyMulticopper oxidaseInterproscan
IPR011706DomainMulticopper oxidase, C-terminalInterproscan
IPR002355Binding_siteMulticopper oxidase, copper-binding siteInterproscan
IPR001117DomainMulticopper oxidase, second cupredoxin domainInterproscan
IPR000980DomainSH2 domainInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR010606DomainMib-herc2Interproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24356SERINE/THREONINE-PROTEIN KINASEInterproscan
PTHR13318UNCHARACTERIZEDInterproscan
PTHR11709MULTI-COPPER OXIDASEInterproscan
PTHR46559TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11Interproscan
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan
PTHR33223CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0018105Biological Processpeptidyl-serine phosphorylationInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0004726Molecular Functionnon-membrane spanning protein tyrosine phosphatase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0030971Molecular Functionreceptor tyrosine kinase bindingInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0070374Biological Processpositive regulation of ERK1 and ERK2 cascadeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17320lplC; putative aldouronate transport system permease protein-Transportersko02000deepkoala

TOP