Detailed information of Aala_g230.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4033583.1, E3 SUMO- ligase KIAA1586-like isoform X1, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P92519Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF01253SUI1Translation initiation factor SUI1DomainInterproscan
PF05046Img2Mitochondrial large subunit ribosomal protein (Img2)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR027080FamilyProtein Unc-13Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR001950DomainSUI1 domainInterproscan
IPR036877Homologous_superfamilySUI1 domain superfamilyInterproscan
IPR007740FamilyLarge ribosomal subunit protein mL49Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR10480PROTEIN UNC-13 HOMOLOGInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46880RAS-ASSOCIATING DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0007528Biological Processneuromuscular junction developmentInterproscan
GO:0016081Biological Processsynaptic vesicle dockingInterproscan
GO:0016082Biological Processsynaptic vesicle primingInterproscan
GO:0016188Biological Processsynaptic vesicle maturationInterproscan
GO:0017075Molecular Functionsyntaxin-1 bindingInterproscan
GO:0019992Molecular Functiondiacylglycerol bindingInterproscan
GO:0030672Cellular Componentsynaptic vesicle membraneInterproscan
GO:0031594Cellular Componentneuromuscular junctionInterproscan
GO:0035249Biological Processsynaptic transmission, glutamatergicInterproscan
GO:0042734Cellular Componentpresynaptic membraneInterproscan
GO:0043195Cellular Componentterminal boutonInterproscan
GO:0061789Biological Processdense core granule primingInterproscan
GO:0098831Cellular Componentpresynaptic active zone cytoplasmic componentInterproscan
GO:0099525Biological Processpresynaptic dense core vesicle exocytosisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10356MYO1; myosin I-Exosomeko04147deepkoala

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