Detailed information of Aala_g2301.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3995720.1, Retrovirus-related Pol poly from transposon TNT 1-94 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2654014-3-3 protein homolog 1 OS=Schistosoma mansoni OX=6183 PE=2 SV=1
Q5PRD014-3-3 protein beta/alpha-A OS=Danio rerio OX=7955 GN=ywhaba PE=2 SV=2
Q5ZKC914-3-3 protein zeta OS=Gallus gallus OX=9031 GN=YWHAZ PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14244Retrotran_gag_3gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF0024414-3-314-3-3 proteinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR029472DomainRetrotransposon Copia-like, N-terminalInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000308Family14-3-3 proteinInterproscan
IPR023410Domain14-3-3 domainInterproscan
IPR036815Homologous_superfamily14-3-3 domain superfamilyInterproscan
IPR023409Conserved_site14-3-3 protein, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47481-Interproscan
PTHR15000ERYTHROID DIFFERENTIATION-RELATED FACTOR 1Interproscan
PTHR43073DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR1886014-3-3 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0002058Molecular Functionuracil bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006210Biological Processthymine catabolic processInterproscan
GO:0006212Biological Processuracil catabolic processInterproscan
GO:0017113Molecular Functiondihydropyrimidine dehydrogenase (NADP+) activityInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0034613Biological Processprotein localizationInterproscan

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