Detailed information of Aala_g2304.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3143966.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6R2W3SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=SCAND3 PE=1 SV=1
A4Z945Protein FAM200C OS=Bos taurus OX=9913 GN=FAM200C PE=2 SV=1
Q8IZ13Protein FAM200C OS=Homo sapiens OX=9606 GN=FAM200C PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051860FamilyPlasmodium Circumsporozoite Invasion ProteinInterproscan
IPR046349Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050569FamilyTrace Amine-Associated ReceptorInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44826SPORE COAT PROTEIN SP85Interproscan
PTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR35317OS04G0629600 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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