Detailed information of Aala_g2319.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH2216094.1, jg20321, partial [Pararge aegeria aegeria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P39769Polyhomeotic-proximal chromatin protein OS=Drosophila melanogaster OX=7227 GN=ph-p PE=1 SV=2
Q8QHL5Polyhomeotic-like protein 2 OS=Danio rerio OX=7955 GN=phc2 PE=2 SV=1
Q9QWH1Polyhomeotic-like protein 2 OS=Mus musculus OX=10090 GN=Phc2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR001565DomainSynaptotagminInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR039808FamilyCadherinInterproscan
IPR006642DomainRad18, zinc finger UBZ4-typeInterproscan
IPR038868FamilyBRCA1-A complex subunit RAP80Interproscan
IPR006578DomainMADF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45716BITESIZE, ISOFORM IInterproscan
PTHR12247POLYCOMB GROUP PROTEINInterproscan
PTHR35846PROTEIN CBG05131Interproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24027CADHERIN-23Interproscan
PTHR15932UBIQUITIN INTERACTION MOTIF-CONTAINING PROTEIN 1Interproscan
PTHR21505UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0042043Molecular Functionneurexin family protein bindingInterproscan
GO:0070382Cellular Componentexocytic vesicleInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0045739Biological Processpositive regulation of DNA repairInterproscan
GO:0070530Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0070531Cellular ComponentBRCA1-A complexInterproscan

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