Gene detail

Detailed information of Aala_g2334.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG5691192.1, hypothetical protein BaRGS_010128 [Batillaria attramentaria]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P08548	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038879	Family	Golgi-associated PDZ and coiled-coil motif-containing protein	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR050621	Family	Tudor domain-containing	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16528	GOLGI-ASSOCIATED PDZ AND COILED-COIL MOTIF-CONTAINING	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47481	-	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR31434	S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR22948	TUDOR DOMAIN CONTAINING PROTEIN	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030140	Cellular Component	trans-Golgi network transport vesicle	Interproscan
GO:0043004	Biological Process	obsolete cytoplasmic sequestering of CFTR protein	Interproscan
GO:0044325	Molecular Function	transmembrane transporter binding	Interproscan
GO:2000009	Biological Process	negative regulation of protein localization to cell surface	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25228	APC15, ANAPC15; anaphase-promoting complex subunit 15	-	Chromosome and associated proteins	ko03036	deepkoala