Detailed information of Aala_g2342.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4035581.1, Retrovirus-related Pol poly from transposon TNT 1-94, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D1C9Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus OX=10090 GN=Rrp7a PE=2 SV=1
Q9Y3A4Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens OX=9606 GN=RRP7A PE=1 SV=2
Q5RA17Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii OX=9601 GN=RRP7A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF08014MATCAPMicrotubule-associated tyrosine carboxypeptidaseDomainInterproscan
PF12923RRP7Ribosomal RNA-processing protein 7 (RRP7) C-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR012548FamilyMicrotubule-associated tyrosine carboxypeptidaseInterproscan
IPR024326DomainRibosomal RNA-processing protein 7, C-terminal domainInterproscan
IPR040446FamilyRibosomal RNA-processing protein 7Interproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR31817-Interproscan
PTHR13191RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0032545Cellular ComponentCURI complexInterproscan
GO:0034456Cellular ComponentUTP-C complexInterproscan

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