Detailed information of Aala_g2347.t1 in Alatina alata

Genomic Location: :...
NR annotation: PIK56201.1, gag-pol polyprotein [Apostichopus japonicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Gene familySubfamily
Transcription Factors FamilyHTH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04991LicDLicD familyDomainInterproscan
PF05225HTH_psqhelix-turn-helix, Psq domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13414TPR_11TPR repeatRepeatInterproscan
PF02494HYRHYR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR007074FamilyLicD familyInterproscan
IPR052613FamilyLicD transferaseInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR033305FamilyHydrocephalus-inducing-likeInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR003410DomainHYR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR13627FUKUTIN RELATED PROTEINInterproscan
PTHR23053DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12558CELL DIVISION CYCLE 16,23,27Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003341Biological Processcilium movementInterproscan
GO:0005930Cellular ComponentaxonemeInterproscan
GO:1904158Biological Processaxonemal central apparatus assemblyInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005680Cellular Componentanaphase-promoting complexInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031145Biological Processanaphase-promoting complex-dependent catabolic processInterproscan
GO:0045842Biological Processpositive regulation of mitotic metaphase/anaphase transitionInterproscan
GO:0051301Biological Processcell divisionInterproscan

TOP