Detailed information of Aala_g2357.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFO37458.1, retrovirus-related pol polyprotein from type-1 retrotransposable element r2 [Plakobranchus ocellatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q92643GPI-anchor transamidase OS=Homo sapiens OX=9606 GN=PIGK PE=1 SV=2
Q9CXY9GPI-anchor transamidase OS=Mus musculus OX=10090 GN=Pigk PE=1 SV=2
Q5R6L8GPI-anchor transamidase OS=Pongo abelii OX=9601 GN=PIGK PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17406Nrap_D5Nrap protein PAP/OAS1-like domain 5DomainInterproscan
PF17405Nrap_D4Nrap protein nucleotidyltransferase domain 4DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00194Carb_anhydraseEukaryotic-type carbonic anhydraseDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005554FamilyNOL6/Upt22Interproscan
IPR035370DomainNrap protein, domain 5Interproscan
IPR035369DomainNrap protein, domain 4Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001148DomainAlpha carbonic anhydrase domainInterproscan
IPR036398Homologous_superfamilyAlpha carbonic anhydrase domain superfamilyInterproscan
IPR023561FamilyCarbonic anhydrase, alpha-classInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR026052FamilyDNA-binding protein inhibitorInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036457Homologous_superfamilyPPM-type phosphatase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR18952CARBONIC ANHYDRASEInterproscan
PTHR11723DNA-BINDING PROTEIN INHIBITORInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0006409Biological ProcesstRNA export from nucleusInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0032545Cellular ComponentCURI complexInterproscan
GO:0034456Cellular ComponentUTP-C complexInterproscan
GO:0004089Molecular Functioncarbonate dehydratase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0140110Molecular Functiontranscription regulator activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24642ZBED5_7_8_9, BUSTER; zinc finger BED domain-containing protein 5/7/8/9-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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