Detailed information of Aala_g2359.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8028968.1, putative E3 ubiquitin-protein ligase HERC1 [Holothuria leucospilota]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q15751Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00086Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF03189OtopetrinOtopetrinFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR042469FamilyE3 ubiquitin-protein ligase HECTD3Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036857Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR000716DomainThyroglobulin type-1Interproscan
IPR051950FamilyDevelopmental regulator and protease inhibitorInterproscan
IPR004878FamilyOtopetrinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46654E3 UBIQUITIN-PROTEIN LIGASE HECTD3Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12352SECRETED MODULAR CALCIUM-BINDING PROTEINInterproscan
PTHR21522PROTON CHANNEL OTOPInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0015252Molecular Functionproton channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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